The kingdom of Metallicana is under attack from the Four Lords of Havoc. This party of villains—ninja master Gara, deadly thunder empress Nei Arshes, cold and calculating Kall-Su, and enigmatic dark priest Abigail—will stop at nothing to get what they want, even if it leaves utter destruction in their wake. High Priest Geo is desperate to help save the kingdom and its people. He unleashes the mighty wizard Dark Schneider, a man who used to be an ally of the villains. Unfortunately, Dark Schneider has his own plans in mind. Will he stop the Four Lords of Havoc or join them in their conquest of the world? [Written by MAL Rewrite]

The film opens with Nefeltari Vivi flying with Pell in a brief flashback. Returning to the present, Vivi and the Straw Hats meet Crocodile's subordinate Mr. 2 Bon Clay. Mr. 2 shows the Straw Hats his devil fruit ability, which allows him to assume the form and voice of anyone whose face he has touched. Vivi describes a brief history on how the Baroque Works leader Crocodile has used Dance Powder while posing as the country's hero. He has also tricked the rebel and royal armies into fighting each other. Once in Alabasta and after crossing the desert, the Straw Hats find the rebel's base deserted, while the rebel army, led by Vivi's childhood friend Koza, witnesses the port town Nanohana being burned by members of Baroque Works disguised as soldiers of the royal army. The rebels decide to attack Alubarna, where at the same time Mr. 2 impersonates the king, Nefeltari Cobra, and orders the royal army to engage. Meanwhile in the desert, the Straw Hats are intercepted by Crocodile and his partner, Ms. All Sunday. Crocodile aims for Vivi, but Luffy stays behind and distracts him, while the other Straw Hats escape. In the ensuing fight, Crocodile defeats Luffy by impaling him through the chest with his hook and buried alive.

Specials released with the anime BD/DVD.

A mysterious device crashes on planet Earth, causing a wildfire near where Gohan Son, Kuririn, Bulma, and Oolong are camping. Unable to fully save the forest, they decide to use the Dragon Balls to restore it to its previous condition. A few days later, a group of unknown warriors plant a seed where the mysterious device had crashed, sprouting a colossal tree that destroys the forest and neighboring cities in the process.

North Kaio contacts Gokuu Son and tells him that this tree is the "Shinseiju"—a tree that absorbs all the nutrients in the planet and leaves it a barren wasteland, all the while growing a mighty fruit capable of providing incredible power to anyone who eats it. After learning of this, Gokuu and his friends try destroying the tree before it is too late, but that may prove to be more difficult than they had previously imagined.

[Written by MAL Rewrite]